image.py | the script you run |
immodules.py | supporting functions for image.py |
example.param | example parameter file with all available parameters commented out |
jvm.sh | shell script to run supermongo and make a spectrum plot. This must be in your $red/../SCRIPTS directory |
jvm.pro | idl script to created a jvm-corrected cube. Must be in your idl path somewhere. |
readme.txt | readme file |
miriad2fits.py | python script that writes out all miriad files to fits format |
python image.py <parameter file> --restart=<keyword>Available keywords for restarting are:
readin, clean, smooth, mask, reclean, moments, jvm, cd, spect. If you do restart, the script will re-make all the files starting at that step. The files made by each step are:
readin | *.map *.beam |
clean | *.clean *.restor *.cc.restor *.resid.restor *.restor.linmos |
smooth | *.restor.convol *.restor.convol.hanning |
mask | *.mask *.region |
reclean | *.mclean *.mrestor *.cc.mrestor *.resid.mrestor *.mrestor.linmos |
moments | *.m0 *.m1 *.m1.mask *.m2.mask *.m2 *.m-2 |
jvm | *.spect.ps *.spect.txt |
cd | *.m0.cd |
spect | *.pyspect.txt *.pyspect.eps |
chmod +x taritup.shThen to run the script type:
taritup.sh <galaxy> <ehex #>The ehex number is just the extension you added to the end of the AIPS run files for that galaxy. Hint:: I find it easiest to alias taritup.sh in my .bashrc file so that I can execute the script from any folder Here is a list of the tar files it produces and what is contained in them:
tar file | sub-tar file | file |
<galaxy>.all.tar.gz | ||
<galaxy>.aips.plots.tar.gz | * -b-*.jpg * -c-*.jpg * -d-*.jpg * -bcd-*.jpg |
|
<galaxy>.aips.fits.tar.gz | * subim* * lincop* * basfit* * newch0* * tab* * dbcon* *<ehex #> |
|
<galaxy>.aips.log.tar.gz | *combiner.txt *plots.txt *preim.txt *readin.txt *out2fits.txt *reduct.txt |
|
<galaxy>.mir.05.tar.gz | * 05*.fits * 05*param * 05*spect* * 05*log * 05*region |
|
<galaxy>.mir.50.tar.gz | * 50*.fits * 50*param * 50*spect* * 50*log * 50*region |
|
<galaxy>.setup.tar.gz | * tab* *param *<ehex #> |
I | Attachment | Action | Size | Date | Who | Comment |
---|---|---|---|---|---|---|
001 | COMBINA.001 | manage | 10 K | 2009-06-03 - 17:22 | UnknownUser | changed output name to |
gz | aipsscripts.tar.gz | manage | 21 K | 2009-04-08 - 11:03 | UnknownUser | newest version |
gz | aipsscriptsv2.tar.gz | manage | 21 K | 2009-04-08 - 11:11 | UnknownUser | |
gz | aipsscriptsv3.tar.gz | manage | 21 K | 2009-04-09 - 11:37 | UnknownUser | |
gz | ascriptv10.tar.gz | manage | 21 K | 2009-04-30 - 17:13 | UnknownUser | |
gz | ascriptv11.tar.gz | manage | 21 K | 2009-05-07 - 09:53 | UnknownUser | |
gz | ascriptv12.tar.gz | manage | 21 K | 2009-05-07 - 14:34 | UnknownUser | |
gz | ascriptv13.tar.gz | manage | 22 K | 2010-04-16 - 12:39 | UnknownUser | |
gz | ascriptv14.tar.gz | manage | 23 K | 2011-01-21 - 13:31 | UnknownUser | |
gz | ascriptv4.tar.gz | manage | 21 K | 2009-04-13 - 15:37 | UnknownUser | |
gz | ascriptv5.tar.gz | manage | 21 K | 2009-04-14 - 14:54 | UnknownUser | |
gz | ascriptv6.tar.gz | manage | 21 K | 2009-04-16 - 21:33 | UnknownUser | |
gz | ascriptv7.tar.gz | manage | 21 K | 2009-04-21 - 11:48 | UnknownUser | |
gz | ascriptv8.tar.gz | manage | 21 K | 2009-04-22 - 16:25 | UnknownUser | |
gz | ascriptv9.tar.gz | manage | 21 K | 2009-04-23 - 14:35 | UnknownUser | |
tar | imagingScript.tar | manage | 30 K | 2009-04-01 - 16:03 | UnknownUser | imaging script v1.1 |
tar | imagingScript.v1.1.tar | manage | 30 K | 2009-04-07 - 18:35 | UnknownUser | |
tar | imagingScript.v1.2.tar | manage | 30 K | 2009-04-27 - 12:29 | UnknownUser | |
tar | imagingScript.v1.3.tar | manage | 30 K | 2009-04-29 - 20:03 | UnknownUser | |
tar | imagingScript.v1.4.tar | manage | 30 K | 2009-05-04 - 13:16 | UnknownUser | fixed bug in createdFiles to enable proper restarts |
tar | imagingScript.v1.5.tar | manage | 30 K | 2009-05-04 - 18:58 | UnknownUser | fixed bug in getNoise |
tar | imagingScript.v1.6.tar | manage | 30 K | 2009-05-05 - 13:36 | UnknownUser | added support for 4 lf channel ranges |
tar | imagingScript.v2.0.tar | manage | 30 K | 2009-05-05 - 19:25 | UnknownUser | moment map making feature! |
tar | imagingScript.v2.1.tar | manage | 40 K | 2009-05-17 - 21:59 | UnknownUser | added jvm, fixed some bugs |
tar | imagingScript.v2.10.tar | manage | 60 K | 2010-03-18 - 16:19 | UnknownUser | miriad imaging script v2.10 - fixed column density map bug |
tar | imagingScript.v2.11.tar | manage | 60 K | 2010-04-13 - 12:13 | UnknownUser | mom2 maps masked at same level as mom1 |
tar | imagingScript.v2.12.tar | manage | 60 K | 2010-07-27 - 15:46 | UnknownUser | |
tar | imagingScript.v2.13.tar | manage | 60 K | 2010-07-27 - 16:46 | UnknownUser | fixed getbeamsize bug |
tar | imagingScript.v2.14.tar | manage | 60 K | 2010-07-28 - 19:55 | UnknownUser | fixed spect so that yaxis labels are correct |
tar | imagingScript.v2.15.tar | manage | 60 K | 2011-01-21 - 19:12 | UnknownUser | added new way of making spectra (spectrum.sh) and script no longer pops up noise plots |
tar | imagingScript.v2.2.tar | manage | 40 K | 2009-05-18 - 14:09 | UnknownUser | added check for denom = 0 in jvm |
tar | imagingScript.v2.3.tar | manage | 50 K | 2009-06-04 - 18:26 | UnknownUser | changed number of iterations in clean to 50000 (from 5000). added "restart=recover" option. [June 4, 2009] |
tar | imagingScript.v2.4.tar | manage | 50 K | 2009-06-09 - 17:23 | UnknownUser | fixed typo in getBeamsize |
tar | imagingScript.v2.5.tar | manage | 50 K | 2009-06-24 - 14:04 | UnknownUser | added jvm-corrected cube, ability to specify number of iterations, moment maps created from jvm-corrected cube |
tar | imagingScript.v2.6.tar | manage | 50 K | 2009-06-24 - 16:08 | UnknownUser | minor fix |
tar | imagingScript.v2.7.tar | manage | 50 K | 2009-06-24 - 16:16 | UnknownUser | |
tar | imagingScript.v2.8.tar | manage | 50 K | 2009-06-26 - 16:54 | UnknownUser | |
tar | imagingScript.v2.9.tar | manage | 60 K | 2009-12-15 - 13:19 | UnknownUser | added restart=cd (column density) |
gz | scripts.tar.gz | manage | 21 K | 2009-04-08 - 11:01 | UnknownUser | newest version |
sh | taritup.sh | manage | 3 K | 2009-06-09 - 15:31 | UnknownUser |